FABI News
24 Aug 2025
Prof. Bernard Slippers conferred the prestigious Humboldt Research Award
FABI Director, Prof. Bernard Slippers has been awarded the prestigious Humboldt Research Award
22 Aug 2025
FABIans take on the Netherlands as part of MycoBiomics exchange visit
Two FABIans visited the Westerdijk Fungal Biodiversity Institute (WI, Utrecht, the Netherlands) for three months as part of the EU-funded Mycobiomics project.
21 Aug 2025
Mathew Harris celebrates the successful completion of his PhD
Congratulations to Mathew Harris on successfully completing his PhD!
21 Aug 2025
FABIan attends Invertebrate Pathology meeting in Chile
FABI PhD candidate, Innocent Rakubu travelled to Chile to attend the SIPS 2025 meeting.
20 Aug 2025
South African Association of Botanists celebrates its 50th Conference
A group from UP attended the recent 50th Annual Conference of the South African Association of Botany
FABI in a nutshell
Research Features
New publication explores the chemodiversity of Penicillium isolated from alpine and arctic environments, including ten new species.
Review emphasizes the importance of understanding the genetics of sex determination for effective genetic pest management in insects.
Eleven new Penicillium and Talaromyces species discovered in South African culture collections.
A new study reveals the presence of Mycotoxins in Eastern Cape maize in South Africa.
Eurotiales update: FABIans Prof. Cobus Visagie and Dr Neriman Yilmaz and their collaborators have published a review of recently described Eurotiales species, including the economically important Aspergillus, Penicillium, Paecilomyces and Talaromyces.
Da Vinci's Yeast: FABIans Prof. Cobus Visagie, Dr Neriman Yilmaz, and their collaborators have recently described and named a newly discovered yeast species of the famous Italian painter, draughtsman, engineer, scientist, theorist, sculptor, and architect Leonardo da Vinci.
The potential economic impact of the PSHB invasion in South Africa has been calculated to be a massive R275 billion over the next ten years, if nothing is done to stop the spread of this invasive beetle. Researchers from FABI collaborated with Stellenbosch University ecologists and economists to model the unmitigated economic impact of this invasion.
A recently published paper in the journal Current Forestry Reports documents a collaboration between an international team of forest pathologists and invasion scientists. Led by Dr Trudy Paap, the authors present a framework for conceptualizing and managing invasive forest pathogens.
A recently published review article by Dr Andi Wilson in a special issue of the journal 'Microbiology & Molecular Biology Reviews' provides details of the genes that are essential to the sexual cycle in filamentous Ascomycete fungi and further describes their functions in a variety of model and non-model species.
Penicillium section Canescentia re-evaluated and five new species described from the fynbos biome in South Africa.
In November 2019, the DSI-NRF Centre of Excellence for Invasion Biology hosted a workshop on ‘Frameworks used in Invasion Science’. The workshop led to a NeoBiota special issue on this theme, and includes a review by FABI researchers and international colleagues, exploring frameworks in the context of forest pathology.
A doctoral study in FABI confirms for the first time the presence of Xylosandrus crassiusculus, a polyphagous ambrosia beetle and its fungal symbiont, Ambroseilla roeperi, in three provinces in South Africa. The authors warn that this beetle species could be a threat to native and plantation trees.
A review on invasive gall-forming wasps that threaten non-native Eucalyptus plantations by researchers in the TPCP appears in Agricultural and Forest Entomology. They profile several species of likely Australian origin that have established on non-native Eucalyptus plantations globally and discuss various challenges to their management.
A study in the TPCP confirms the identity of seven novel fungal species associated with Dendroctonus valens, the red turpentine beetle. The study follows on surveys on the fungal associates of the beetle in China and North America. Results from this work appear in Persoonia.
A postdoctoral study in the TPCP describes two novel Huntiella species in the African clade, bringing the number of known species in the genus to 31. Though closely related, the two species display different mating systems. Outcomes from this study appear in the journal MycoKeys.
A review of the invasion history and global management strategies of Eucalyptus snout beetles in the Gonipterus scutellatus species complex by researchers in the TPCP appears in the Journal of Pest Science.
In a collaborative venture with Dr Jos Houbraken (Westerdijk Fungal Biodiversity Institute, the Netherlands), Prof. Cobus M Visagie, Dr Neriman Yilmaz (both from FABI) and others have recently completed and published a major study updating the taxonomy of the Eurotiales.
A study in the Forest Molecular Genetics (FMG) Programme at FABI interrogates the benefits of implementing genomic selection for growth and wood quality traits in an established Eucalyptus grandis breeding programme in South Africa. Outcomes from this study appear in an article.
The first study on alternative weed and cultivated hosts of Spongospora subterraneaf. sp. subterranea (Sss), in southern Africa identifies two species as ideal trap crops for rotation with potatoes. The study also introduces three new families to the known hosts of Sss in the region.
A consortium of microbiologists from around the globe, FABI included, is pushing for an overhaul in how scientific names are assigned to uncultivated bacteria and archaea. Despite their ecological, agricultural and medical importance, these organisms traditionally have not been recognized by the international body governing the nomenclature of prokaryotes.
Professor Cobus Visagie is a researcher in the Applied Mycology group at FABI. One of the group’s research goals is to discover fungal diversity in South Africa, and Cobus’ research is strongly focussed on the economically important genera Aspergillus, Penicillium and Talaromyces.
Postdoctoral research by Dr Norman Muzhinji in the Potato Pathology Programme at the Forestry and Agricultural Biotechnology Institute (FABI) sheds light on the genetic structure and diversity of Spongospora subterranea f. sp. subterranea in four potato-growing regions in South Africa, providing valuable insights on its management.
An MSc study by Kira Lynn in the RGE-FABI Tree Health Programme at the University of Pretoria has described a new Fusarium species, Fusarium rekanum sp. nov., associated with Euwallacea perbrevis, an ambrosia beetle species infesting Acacia crassicarpa plantations in Riau, Indonesia.
FABI postdoctoral Fellow Dr Andi Wilson has established a CRISPR-Cas9-based genome editing protocol for use in Huntiella omanensis, a tree-inhabiting fungus belonging to the Ceratocystidaceae family.
Research undertaken as part of a PhD study by Molly Malefo at the University of Pretoria’s Department of Plant and Soil Sciences and Forestry and Agricultural Biotechnology Institute sheds more light on the role of protease inhibitors in plants under drought stress.
The South African National Biodiversity Institute (SANBI) has funded a postdoctoral research project dedicated to monitoring plant health in botanical gardens and arboreta across South Africa. Two postdoctoral Fellows at the University of Pretoria’s Forestry and Agricultural Biotechnology Institute have held these fellowships.
The first comprehensive study mapping the distribution and genetic diversity of invasive Eucalyptus insect pests in sub-Saharan Africa confirms the presence of five major foliage-feeding species in 14 countries. The results of this study have implications on the quarantine, future research and management of these pests on the continent and beyond.
Dr Joey Hulbert broke new ground when he became the first candidate at the Forestry and Agricultural Biotechnology Institute to complete a PhD study incorporating citizen science. Citizen science is an approach that involves members of the public as active participants in scientific research.
FABI technology unravels the genetics behind fungal genome evolution The RIPper is a bioinformatics tool for the for quantifying genome-wide RIP mutations in fungal genomes. The strength of this software lies in the automation of laborious techniques to study the mutation process called Repeat-Induced Point mutations (RIP). The RIPper applies these technique
With the increased availability in genome data, inferences regarding evolutionary relationships among taxa can now be performed on a genome-wide scale. But it is widely accepted that not all parts of such massive datasets support the same evolutionary hypothesis. Because of this, a group of researchers at FABI recently investigated the effect of this.
The use of genome data to characterize species and elucidate relationships, particularly between problematic taxa, has become routine practice in bacteria. Recently, researchers from FABI joined in an international effort to describe two novel genera and characterize these within the larger context of the important bacterial group Burkholderia.
A PhD student in FABI, Runlei Chang, has discovered and described 19 new fungal species from China as part of the research for his thesis. These fungi are all associated with conifer-infesting bark beetles and their mites and belong to well-known genera such as Ophiostoma and Leptographium.
Two research papers from FABI were selected as cover stories in two consecutive issues of the international journal, Plant Pathology. The journal is published by Wiley for the British Society of Plant Pathology.
Plastids play an integral role in wood formation, and yet they are routinely ignored in the study of xylogenesis in forest trees. Desre Pinard and Dr Eshchar Mizrachi have published a review highlighting the unique biology of plastids in wood, suggesting that a new type of plastid, the xylopast, exists.
Approaches for characterizing metabolic potential from genomic sequences have previously been predicted to be useful in the description of bacterial taxa. Dr Marike Palmer, has recently employed these approaches for identifying biological processes contributing to the divergence of bacteria with a variety of lifestyles.
Comparative genomics is shaping our notion of what fungal species are. Based on current data, these unique evolutionary units are separated from one another by boundaries that are porous under certain conditions. This affects our expectations regarding their population biology and evolution, and our strategies for recognizing and controlling them.
The Polyphagous Shot Hole Borer is an ambrosia beetle native to Southeast Asia. In 2017 this pest was detected in South Africa. Its presence has since been confirmed in all provinces except Limpopo. The beetle has a symbiotic relationship with the fungus Fusarium euwallaceae, which causes branch die-back and death of susceptible trees.
Born in 1974, Pretoria.
Studying his Art Degree at the University of Pretoria Botha became known for his sculptures of cut paper from his first exhibition as a student. Probably best known for the controversy he stirred when creating a figure of Christ from bibles cut into the form. Today he is one of South Africa’s leading sculptors.
Wall Flowers [Carved paper, 2000]
The sculpture is three heads of Hyenas cut from government forms and documents. Botha plays on the government employee being nothing more than a wall flower sitting and watching the world happen around them, without having any influence on it anymore like a stuffed animal on the wall.
Wall Flowers
Wall Flowers
Wall Flowers
Biodiversity is the essence of ecosystems to which the well-being of mankind is intimately linked. Biodiversity refers to diversity at many levels, including diversity within species as reflected in the diversity within humanity, to the diversity of different species that rely on each other within an ecosystem.
No other feature on this planet is as complex or dynamic and our current society is forcing it to change dramatically. A recent study by IPBES reports that as many as a million species are currently threatened with extinction.
Many misunderstood scientific complexities can be better understood through the use of art. Art can provide new perspectives that enable deeper engagement and better understanding.
Art can be an incentive for communicating information to people while actively inspiring them to seek new understanding with open and curious minds. In biodiversity, art can raise awareness to the beauty we often overlook and conscientise us to our responsibility to conserve, protect and promote biodiversity.
With such expansive human influences over biodiversity, we are creating tremendous impacts on the sustainability of nature and consequently affecting our very own well-being. It is urgent to find ways that will connect humanity to nature in ways that inspire and encourage learning and empathy, which are the first steps towards the action we need to ensure the future sustainability of this planet.
Art provides us with this opportunity and in this collaboration between the Javett Arts Centre and FABI, we are taking a step towards inspiring action.
The Art in Biodiversity video links:
Defining Biodiversity And Its Importance In Art And Culture
Art In The Formal Recording Of Biodiversity
Biodiversity In Art In FABI
Biodiversity Themed Art In The Javett Art Centre
Destruction And Hope In Artistic Impressions Of Biodiversity
The Fruit of the Heritage Tree (Dr Josephine Queffelec):
South Africa marks National Heritage Day on 24 September. To celebrate the diverse heritage of the FABI community, Dr Josephine Queffelec launched the “Picking the Fruit of the Heritage Tree” initiative where FABIans were invited to celebrate their diversity by submitting stories and poems on their connections to plants, pests and pathogens. This also celebrated 2020 as the International Year of Plant Health.
In 2020, the narratives of the 13 participants were as diverse as the origins of the contributors, spanning Chile, Colombia, Ethiopia, France, India, Japan, Namibia, South Africa and Zimbabwe. From trees that connect the dead to the living, insects that are welcomed with ceremony and traditional beer to aphrodisiac “big bottomed ants” and plants to keep in your “herbal first aid box”, FABIans revealed fascinating glimpses to their ancestry, childhoods and the richness of the idioms in their languages and cultures in their creative submissions. (Click here to view the 2020 Project)
In 2021 Josephine again encouraged FABIans to participate in this project entitled “The Vines of Wisdom” on the second year of this celebration of FABIans’ heritage. (Click here to view the 2021 Project)
Zeiss Microscopy Image Contest 2021 (Prof. Cobus Visagie):
Professor Cobus Visagie was judged one of the winners of the international Zeiss Microscopy Image Contest 2021. Cobus’ entry of ‘Synnemata of a new Talaromyces species’ won joint third place in the contest where Zeiss microscope users from 50 countries submitted more than 1,300 entries. The image shows a new Talaromyces species found in South Africa, growing on oatmeal as a growth medium and acquired with a Zeiss Axio Zoom.V16. The competition was part of Zeiss’ anniversary year, and celebrates the work of researchers using microscopy in various application fields.
The winning entries can be viewed here and Cobus' wining image can be viewed here.
Born in 1968, Vereeniging.
Buitendach completed her BA in Fine Arts from the University of Pretoria in 1993.
Retha Buitendach's artworks deals with nature in both its macrocosmic and microcosmic detail. The hidden interconnectedness of all living things is an important underlying theme, as is the chance connections between seemingly unrelated things or even words. Unusual and microscopic life-forms as well as those seen every day are sometimes portrayed in unusual contexts, thereby inducing the onlooker to discover them anew. The human figure is seldom directly visible in her artworks, although human presence is often implied. Man is shown to be unique in his ability to experience nature as a supremely beautiful artwork and to be unique in his ability to destroy it all. Her work is both naturalistic and surrealistic, combining the recognisable with what the imagination can add to it.
Her oil paintings hang in many galleries, homes and corporate office throughout South Africa. She also known for her unique use of unconnected wooden objects to recreate natural life forms. By doing this she forces the viewer to rediscover the form they are looking at by using their imagination.
Cerambycid
New Publications
Pham NQ, Liu FF, Duong TA, Wingfield BD, Chen SF, Wingfield MJ. (2025) Genetic diversity of Calonectria reteaudii isolates from infected Eucalyptus leaves and associated soils indicates a phyllosphere origin of the pathogen. Forest Pathology 55:e70037.
10.1111/efp.70037
Schröder ML, Hurley BP, Wingfield MJ, Slippers B, Garnas JR. (2025) Thermal limitations to the biological control of Gonipterus sp. n. 2 (Coleoptera: Curculionidae) in South African Eucalyptus plantations. Agricultural and Forest Entomology
10.1111/afe.70002
Lynn KMT, Wingfield MJ, Tarigan M, Durán A, Santos SA, Nel WJ, Barnes I. (2025) Investigating bark, ambrosia and nitidulid beetle (Coleoptera: Scolytinae and Nitidulidae) communities and their potential role in the movement of Ceratocystis manginecans in commercial forestry plantations in Riau, Indonesia. Agricultural and Forest Entomology
10.1111/afe.12698
Solís M, Hammerbacher A, Wingfield MJ, Naidoo S. (2025) Transcriptional responses of Eucalyptus to infection by an aggressive leaf blight pathogen reveal the role of host secondary metabolites during pathogen germination. Plant Molecular Biology 115
10.1007/s11103-025-01625-2
Coertze S, Coetzee B, Basson E, de Villiers D, Makhura T, Moster D, Slippers B, Rose LJ, Visagie CM, Read D. (2025) First Report of Clavibacter nebraskensis Causing Goss’s Bacterial Leaf Blight on Maize (Zea mays) in South Africa. Plant Disease 109:1580.
10.1094/PDIS-01-25-0164-PDN
Overy DP, Frisvad JC, Witte TE, Hicks CL, Hermans A, Sproule A, Louis-Seize G, Seifert KA, Yilmaz N, Price J, van Vuuren NI, Visagie CM. (2025) Chemodiversity of Penicillium isolated from alpine and arctic environments, including ten new species. Studies in Mycology 112:75–116.
10.3114/sim.2025.112.03
Harris MA, Kemler M, Slippers B, Hassel N, Tsamba J, Arthan W, Kellogg EA, AuBuchon-Elder T, Vorontsova MS, Archibald S, Hempson GP, Lehmann CER, Besnard G, Bergerow D, Brachmann A, Solofondranohatra CL, Greve M. (2025) Productivity drives leaf mycobiome diversity patterns at global and continetal scales. Global Ecology and Biogeography 34:e70094.
10.1111/geb.70094
Gao M, Yan Z, Liu Z, Jiang Y, Liu T, Miao X, Dai M, Bose T, Chang R. (2025) A novel Arthrobotrys species: Taxonomic characterization, nematicidal activity, and multi-omics insights into nematode predation. Biological Control 208:105853.
10.1016/j.biocontrol.2025.105853
Esterhuizen HJ, Slippers B, Bosman AS, Roux J, Jones W, Bose T, Hammerbacher A. (2025) Early detection of Phytophthora root rot in Eucalyptus using hyperspectral reflectance and machine learning. Computers and Electronics in Agriculture 237:110761.
10.1016/j.compag.2025.110761
Pham NQ, Wingfield BD, Marincowitz S, Brawner JT, Hulcr J, Wingfield MJ. (2025) Cryphonectria canker on Eucalyptus in Florida reconsidered. Forest Pathology 55:e70031.
10.1111/efp.70031
Crous PW, Catcheside DEA, Catcheside PS, Alfenas AC, Alfenas RF, Barreto RW, Lebel T, Balashov S, Broadbridge J, Jurjević , De la Peña-Lastra S, Hoffmann R, Mateos A, Riebesehl J, Shivas RG, Soliz Santander FF, Tan YP, Altés A, Bandini D, Carriconde F, Cazabonne J, Czachura P, Gryta H, Eyssartier G, Larsson E, Pereira OL, Rigueiro-Rodríguez A, Wingfield MJ, Ahmad W, Bibi S, Denman S, Esteve-Raventós F, Hussain S, Illescas T, Luangsa-ard JJ, Möller L, Mombert A, Noisripoom W, Olariaga I, Pancorbo F, Paz A, Piątek M, Polman-Short C, Suárez E, Afshan NS, Ali H, Arzanlou M, Ayer F, Barratt J, Bellanger J, Bidaud A, Bishop-Hurley SL, Bohm M, Bose T, Campo E, Chau NB, Çolak F, Cordeiro TRL, Cruz MO, Custódio FA, Couceiro A, Darmostuk V, Dearnaley JDW, De Azevedo Santiago ALCM, De Freitas LWS, Yáñez-Morales MDJ, Domnauer C, Dentinger B, Dhileepan K, De Souza JT, Dovana F, Eberhardt U, Eisvand P, Erhard A, Fachada V, García-Martín A, Groenewald M, Hammerbacher A, Harms K, Haroon S, Haqnawaz M, Henriques S, Hernández AJ, Jacobus LM, Jaen-Contreras D, Jangsantear P, Kaygusuz O, Knoppersen R, Kumar TKA, Lynch MJ, Mahiques R, Maraia GL, Marbach PAS, Mehrabi-Koushki M, Miller PR, Mongkolsamrit S, Moreau P, Oberlies NH, Oliveira JA, Orlovich D, Pérez-Méndez AS, Pinto A, Raja HA, Ramírez GH, Raphael B, Rodrigues A, Rodrigues H, Ramos DO, Safi A, Sarwar S, Saar I, Sánchez RM, Santana JS, Scrace J, Sales LS, Silva LNP, Stryjak-Bogacka M, Tacconi A, Thanh VN, Thomas A, Thuy NT, Toome M, Valdez-Carrazco JM, Van Vuuren NI, Vasey J, Vauras J, Vila-Viçosa C, Villarreal M, Visagie CM, Vizzini A, Whiteside EJ, Groenewald JZ. (2025) Fungal Planet description sheets: 1781–1866. Persoonia 54:327–587.
10.3114/persoonia.2025.54.10
Nzuza P, Schröder ML, Heim RJ, Daniels L, Slippers B, Hurley BP, Germishuizen I, Sivparsad B, Roux J, Maes WH. (2025) Assessing Gonipterus defoliation levels using multispectral unmanned aerial vehicle (UAV) data in Eucalyptus plantations. Ecological Informatics 90:103301.
10.1016/j.ecoinf.2025.103301
Kunene S, Mmushi TJ, Steenkamp E, Motaung T. (2025) Pinus-derived membrane vesicles disrupt pathogenic metabolism in fungi. plant biology
10.1111/plb.70069 
Theron CA, Wingfield MJ, Ahumada R, Carnegie AJ, Fraser S, Rodas C, Barnes I. (2025) Diversity and distribution of Lophodermium species on non-native Pinus species in the southern hemisphere. Mycological Progress 24(44)
10.1007/s11557-025-02056-5
Msweli D, Geerts S, Nndanduleni M, Paap T. (2025) Evaluation of phosphite to protect a South African Proteaceae from Phytophthora root rot. Journal of Plant Pathology
10.1007/s42161-025-01945-8
Dewing C, Yilmaz N, Steenkamp ET, Wingfield BD, Visagie CM. (2025) Capturing the fungal diversity hidden in Eastern Cape dairy pastures. Mycological Progress 24(1):38.
10.1007/s11557-025-02059-2
Nel WJ, Duong TA, Fell S, Herron DA, Paap T, Wingfield MJ, de Beer ZW, Hulcr J, Johnson AJ. (2025) A checklist of South African bark and ambrosia beetles (Coleoptera: Curculionidae: Scolytinae, Platypodinae). Zootaxa 5648(1):1-101.
10.11646/zootaxa.5648.1.1
Dewing C, Yilmaz N, Steenkamp ET, Wingfield BD, Visagie CM. (2025) Capturing the fungal diversity hidden in Eastern Cape dairy pastures. Mycological Progress 24:38.
10.1007/s11557-025-02059-2
Chang R, Yan Z, Jiang J, Wang Y, Si H, Bose T, Miao C. (2025) Four novel endolichenic fungi from Usnea spp. (Lecanorales, Parmeliaceae) in Yunnan and Guizhou, China: Taxonomic description and preliminary assessment of bioactive potentials. MycoKeys 118:55–80.
10.3897/mycokeys.118.155248
Lötter A, Bruna T, Duong TA, Barry K, Lipzen A, Daum C, Yoshinaga Y, Grimwood J, Jenkins JW, Talag J, Borevitz J, Lovell JT, Schmutz J, Wegrzyn JL, Myburg AA. (2025) A haplotype-resolved reference genome for Eucalyptus grandis. G3 Genes|Genomes|Genetics
10.1093/g3journal/jkaf112
Wingfield MJ, Pham NQ, Marincowitz S, Wingfield BD. (2025) Cryphonectriaceae: Biodiverse and threatening tree pathogens in the tropics and southern hemisphere. Annual Review of Phytopathology 63
10.1146/annurev-phyto-121823-030316
Magagula P, Swart V, Fourie A, Vermeulen A, Nelson JH, van Rooyen Z, van den Berg N. (2025) Avocado rhizosphere community profiling: white root rot and its impact on microbial composition. Frontiers in Microbiology 16
10.3389/fmicb.2025.1583797
Marincowitz S, Pham NQ, Wingfield BD, Wingfield MJ. (2025) Microfungi associated with dying quiver trees (Aloidendron dichotomum) in South Africa. Fungal Systematics and Evolution 16:71–80.
10.3114/fuse.2025.16.5
Pham NQ, Marincowitz S, Crous PW, Wingfield MJ. (2025) Diversity of soil-borne Gliocladiopsis from Indonesia, Malaysia and Vietnam. Fungal Systematics and Evolution 16:81–92.
10.3114/fuse.2025.16.6
Tanney JB, Kemler M, Vivas M, Wingfield MJ, Slippers B. (2025) Silent invaders: The hidden threat of asymptomatic phytobiomes to forest biosecurity. New Phytologist
10.1111/nph.70209
Fick A, Swart V, Van den Berg N. (2025) In silico prediction method for plant Nucleotide-binding leucine-rich repeat- and pathogen effector interactions. The Plant Journal 122:e70169.
10.1111/tpj.70169
Bose T, Wingfield MJ, Brachmann A, Witfeld F, Begerow D, Kemler M, Dovey S, Roux J, Slippers B, Vivas M, Hammerbacher A. (2025) Removal of organic biomass in Eucalyptus plantations has a greater impact on fungal than on bacterial networks. Forest Ecology and Management 586:122734.
10.1016/j.foreco.2025.122734
Woodward S, Amin H, Mártin-Gárcia J, Solla A, Diaz-Vazquez R, Romeralo C, Alves A, Pinto G, Herron D, Fraser S, Zas R, Doğmuş-Lehtijärvi HT, Bonello P, Wingfield MJ, Witzell J, Diez JJ. (2025) Host-pathogen interactions in the Pine-Fusarium circinatum pathosystem and the potential for resistance deployment in the field. Forest Pathology 55(2):e70020.
10.1111/efp.70020
Maduke N, Slippers B, Van der Linde E, Wingfield M, Fourie G. (2025) Botryosphaeriaceae associated with racemes, fruits and leaves of macadamia in South Africa. Plant Pathology 0:1–15:1–15.
10.1111/ppa.14107
Hulcr J, Barnes I, Barnes M, Gazis R, Hammerbacher A, Johnson AJ, Lynch S, Lynn K, Marais GC, Mayers CG, Nel W, Villari C, Wingfield BD, Wingfield MJ. (2025) From forest to fungus: A roadmap to bark beetle mycobiome research. Phytoparasitica 53(45)
10.1007/s12600-025-01246-x
Knoppersen RS, Bose T, Coutinho TA, Hammerbacher A. (2025) Inside the Belly of the Beast: Exploring the Gut Bacterial Diversity of Gonipterus sp. n. 2. Microbial Ecology 88:27.
10.1007/s00248-025-02524-1
Bose T, Roux J, Titshall L, Dovey SB, Hammerbacher A. (2025) Mulching of post-harvest residues and delayed planting improves fungal biodiversity in South African Eucalyptus plantations and enhances plantation productivity. Applied Soil Ecology 210:106091.
10.1016/j.apsoil.2025.106091
Wychkuys KA, Giron E, Hyman G, Barona E, Castro-Llanos FA, Sheil D, Yu L, Du Z, Hurley BP, Slippers B, Germishuizen I, Bojacá CR, Rubiano M, Sathyapala S, Verchot L, Zhang W. (2025) Biological control protects carbon sequestration capacity of plantation forests. Entomologia Generalis
10.1127/entomologia/2025/3015
Balocchi F. (2025) Risk Analysis for Alien Taxa (RAAT) for Phytophthora cinnamomi in South Africa.
10.5281/zenodo.14858265
Paap T, Balocchi F, Wingfield MJ. (2025) The root rot pathogen Phytophthora cinnamomi: a long-overlooked threat to the Cape Floristic Region of South Africa. Biological Invasions 27(4)
10.1007/s10530-025-03570-z
Harikrishnan K, Rajeshkumar KC, Patil PM, Jeewon R, Visagie CM. (2025) Aspergillus dhakephalkarii and A. patriciawiltshireae spp. nov., two new species in Aspergillus sect. Nigri ser. Japonici (Eurotiales, Aspergillaceae) from India. Phytotaxa 695:57–79.
10.11646/phytotaxa.695.1.2
Wilson A, van Dijk A, Marx B, du Plessis D, Terblanche G, Bornman S, Wilken PM, Duong TA, De Fine Licht HH, Wingfield BD. (2025) Extracting Protoplasts from Filamentous Fungi Using Extralyse, An Enzyme Used in the Wine Industry. Current Protocols 5(e70122):1-29.
10.1002/cpz1.70122
Dewing C, Visagie CM, Steenkamp ET, Wingfield BD, Yilmaz N. (2025) Three new species of Fusarium (Nectriaceae, Hypocreales) isolated from Eastern Cape dairy pastures in South Africa. MycoKeys 115:241–271.
10.3897/mycokeys.115.148914
van der Merwe E, Slippers B, Dittrich-Schröder G. (2025) Exploring artificial diets for the laboratory rearing of Sirex noctilio late-instar larvae: a qualitative study. Zenodo
10.5281/zenodo.15049303
Mapfumo P, Archer E, Swanevelder ZH, Wilken M, Creux N, Read DA. (2025) Plant Pathology. Genomic Characterisation of Bidens mottle virus in South Africa and an Assessment of the Impact on Helianthus annuus (Sunflower) in an Open Field Setting
10.1111/ppa.14089
Brasier CM, Grünwald NJ, Bourret TB, Govers F, Scanu B, Cooke DEL, Bose T, Hawksworth DL, Abad ZG, Albarracin MV, Alsultan W, Altamirano-Junqueria AE, Arifin AR, Arnet MJ, Aumentado HDR, Bakonyi J, Belisle WH, Benigno A, Bienapfl JC, Bilodeau GJ, Blair JE, Botella L, Brandano A, Cacciola SO, Carbone I, Castroagudin VL, Chaendaekattu N, Consford JD, Corcobado T, Covey PA, Daniels HA, Deidda A, Dorrance AE, Dort EN, Drenth A, Drizou F, Evangelisti E, Fajardo SN, Fang Y, Ference CM, Frankel SJ, Goss EM, Guest DI, Hardy GESJ, Harris ARH, Hawku MD, Heungens K, Hong C, Horner IJ, Horta Jung M, Iyanda OJ, Jamieson B, Jeffers SN, Judelson HS, Junaid M, Kalogeropoulou E, Kamoun S, Kang S, Kasuga T, Kudláček T, LeBoldus J, Lee CA, Li D, Llanos AK, Lopez-Nicora HD, Machado H, Di San Lio GM, Maia C, Mandal K, Manosalva P, Martin FN, Matson MEH, McDougal RL, McDowell JM, Michelmore RW, Milenković I, Moricca S, Mostowfizadeh-Ghalamfarsa R, Nagy Z, Nikolaeva EV, Ortega-López P, Paap T, Parada-Rojas CH, Peduto Hand F, Perez-Sierra A, Pettersson M, Prasad P, Puig AS, Raco M, Rajput NA, Ristaino JB, Rooney-Latham S, Seidl MF, Shamoun SF, Solla A, Spies CFJ, Sudermann MA, Swiecki TJ, Tian M, Tripathy S, Uematsu S, Van Poucke K, Vichou AE, Walter M, Webber JF, Williams NM, Wingfield MJ, Yadav D, Yang X, Jung T. (2025) Preserving the Biologically Coherent Generic Concept of Phytophthora, ‘Plant Destroyer’. Phytopathology
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Stazione L, Corley JC, Allison JD, Hurley BP, Lawson SA, Lantschner MV. (2025) Novel associations among insect herbivores and trees: Patterns of occurrence and damage on pines and eucalypts. Ecological Applications 35:e70018.
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van den Berg N, Magagula P, Backer R, Swart V. (2025) Towards developing an integrated approach for the treatment of white root rot in commercial avocado orchards. Phytoparasitica 53(32)
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Townsend G, Hill M, Hurley BP, Roets F. (2025) Escalating threat: increasing impact of the polyphagous shot hole borer beetle, Euwallacea fornicatus, in nearly all major South African forest types. Biological Invasions 27
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Makunde PT, Slippers B, Bush S, Hurley BP. (2025) Host specificity and host stage preference of Psyllaephagus species (Hymenoptera: Encyrtidae) towards invasive eucalypt psyllids (Hemiptera: Aphalaridae). Agricultural and Forest Entomology :1-13.
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Tarigan M, Wingfield MJ, Jami F, Oliveira LSS, Saha MA, Durán A, Pham NQ. (2025) Pathogenicity of Pythium myriotylum on Acacia crassicarpa and Acacia mangium × Acacia auriculiformis clones in Indonesia. Southern Forests: a Journal of Forest Science 87:1–5.
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D’Angelo D, Hu H, Lahoz E, Risteski J, Steenkamp E T, Viscardi M, van der Nest M A, Wu Y, Yu H, Zhou J, Karandeni Dewage C S, Kotta-Loizou L I, Stotz H U, Fitt B D L, Huang Y, Hu Y, Kiss L, Sorrentino R, Nkomo T, Zhou X, Vaghefi N, Sonnekus B, Bose T, Cerrato D, Cozzolino L, Creux N, D’Agostino N, Fourie G, Fusco G, Hammerbacher A, Idnurm A, Wingfield BD. (2025) IMA GENOME - F20 A draft genome assembly of Agroathelia rolfsii, Ceratobasidium papillatum, Pyrenopeziza brassicae, Neopestalotiopsis macadamiae, Sphaerellopsis filum and genomic resources for Colletotrichum spaethianum and Colletotrichum fructicola. IMA Fungus 16:e141732.
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Espach A, Esterhuizen L, Africander N, Thiart S, Read DA, Pietersen G. (2025) First report of pepper ringspot virus on potato (Solanum tuberosum) in South Africa. Journal of Plant Pathology
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Muema EK, van Lill M, Venter SN, Claassens R, Steenkamp ET. (2025) Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea. Antonie van Leeuwenhoek 19(3):1-20.
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Motaung TE, Ratsoma FM, Kunene S, Santana QC, Steenkamp ET, Wingfield BD. (2025) Harnessing exogenous membrane vesicles for studying Fusarium circinatum and its biofilm communities. Microbial Pathogenesis
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