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Workshops & Symposia

The annual meeting of the TPCP and CTHB
1-5 October 2018

Spring School on Solar Energy and Photosynthesis

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Advanced Phylogenetic WorkshopsAdvanced Phylogenetic Workshops 2018
21-25 May 2018

Advanced Phylogenetics

Workshop 1

2018

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New Publications

De Beer ZW. (2018) A tiny beetle and its deadly fungus is threatening South Africa’s trees. The Conversation https://bit.ly/2F0J2Ln
Benndorf R, Guo H, Sommerwerk E, Weigel C, Garcia-Altares M, Martin K, Hu H, Küfner M, De Beer ZW, Poulsen M, Beemelmanns C. (2018) Natural products from Actinobacteria associated with fungus-growing termites. Antibiotics 7(3):83. 10.3390/antibiotics7030083 PDF
Fru FF, Steenkamp ET, Wingfield MJ, Roux J. (2018) High genetic diversity of Fusarium circinatum associated with the first outbreak of pitch canker on Pinus patula in South Africa. Southern Forest: a Journal of Forest Science 10.2989/20702620.2018.1496312
Bose T, Wingfield MJ, Roux J, Vivas M, Burgess TI. (2018) Community composition and distribution of Phytophthora species across adjacent native and non-native forests of South Africa. Fungal Ecology 36:17-25. 10.1016/j.funeco.2018.09.001https://www.sciencedirect.com/science/article/pii/S1754504818301740
Nel WJ, Duong TA, Wingfield MJ, Wingfield BD, Hammerbacher A, De Beer ZW. (2018) Heterothallism revealed in the root rot fungi Berkeleyomyces basicola and B. rouxiae. Fungal Biology 10.1016/j.funbio.2018.08.006
Baron S, Van der Merwe NA, Maritz-Olivier C. (2018) The genetic relationship between R. microplus and R. decoloratus ticks in South Africa and their population structure. Molecular Phylogenetics and Evolution 129:60-69. 10.1016/j.ympev.2018.08.003 PDF
Chang R, Duong TA, Taerum SJ, Wingfield MJ, Zhou XD, Yin M, De Beer ZW. (2018) Ophiostomatoid fungi associated with the spruce bark beetle Ips typographus, including 11 new species from China. Persoonia 42:50-74. 10.3767/persoonia.2019.42.03 PDF
Jami F , Marincowitz S, Slippers B, Wingfield MJ. (2018) New Botryosphaeriales on native red milkwood (Mimusops caffra). Australasian Plant Pathology 10.1007/s13313-018-0586-4 PDF
Estrada-de los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Bueno dos Reis F, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK. (2018) Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae. Genes 9(8):389. 10.3390/genes9080389
Laubscher M, Brown K, Tonfack LB, Myburg AA, Mizrachi E, Hussey SG. (2018) Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development. Scientific Reports 8:10983. 10.1038/s41598-018-29278-w
Naalden D, Haegeman A, de Almeida‐Engler J, Eshetu FB, Bauters L, Gheysen G. (2018) The Meloidogyne graminicola effector Mg16820 is secreted in the apoplast and cytoplasm to suppress plant host defense responses. Molecular plant pathology 10.1111/mpp.12719https://onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12719
Marin-Felix Y, Hernandez-Restrepo M, Wingfield M, Akulov A, Carnegie A, Cheewangkoon R, Gramaje D, Groenewald J, Guarnaccia V, Halleen F, Lombard L, Luangsaard J, Marincowitz S, Moslemi A, Mostert L, Quaedvlieg W, Schumacher R, Spies C, Thangavel R, Taylor P, Wilson A, Wingfield B, Wood A, Crous P. (2018) Genera of phytopathogenic fungi: GOPHY 2. STUDIES IN MYCOLOGY 92:47 - 133. 10.1016/j.simyco.2018.04.002
Burgess TI, Tan YP, Garnas J, Edwards J, Scarlett KA, Shuttleworth LA, Daniel R, Dann EK, Parkinson LE, Dinh Q, Shivas RG, Jami F. (2018) Current status of the Botryosphaeriaceae in Australia. Australasian Plant Pathology 10.1007/s13313-018-0577-5 PDF
Polyphagous Shot Hole Borer (Euwallacea sp.) and Fusarium dieback (Fusarium euwallaceae)
Tchotet Tchoumi JM, Coetzee MPA, Rajchenberg M, Wingfield MJ, Roux J. (2018) Three Ganoderma species, including Ganoderma dunense sp. nov., associated with dying Acacia cyclops trees in South Africa. Australasian Plant Pathology 10.1007/s13313-018-0575-7
Nicole M. Van Dam, Mesfin Wondafrash, Vartika Mathur , Tom O. Tytgat. (2018) Differences in Hormonal Signaling Triggered by Two Root-feeding Nematode Species Result in Contrasting Effects on Aphid Population Growth. Frontiers in Ecology and Evolution 10.3389/fevo.2018.00088
Mlonyeni XO, Wingfield MJ, Greeff JM, Wingfield BD, Slippers B. (2018) Genetic diversity of Amylostereum areolatum, the fungal symbiont of the invasive woodwasp Sirex noctilio in South Africa. Forest Pathology :e12449. 10.1111/efp.12449
Tan YP, Shivas RG, Marney TS , Edwards J , Dearnaley J , Jami F , Burgess TI. (2018) Australian cultures of Botryosphaeriaceae held in Queensland and Victoria plant pathology herbaria revisited. Australasian Plant Pathology PDF
Jami F , Marincowitz S, Crous PW, Jacobsohn A, Wingfield MJ. (2018) A new Cytospora species pathogenic on Carpobrotus edulis in its native habitat. FUSE 2 10.3114/fuse.2018.02.03 PDF
Wingfield BD, Bills GF, Dong Y, Huang W, Nel WJ, Swalarsk-Parry BS, Vaghefi N, Wilken PM, An Z, de Beer ZW, De Vos L, Chen L, Duong TA, Gao Y, Hammerbacher A, Kikkert JR, Li Y, Li H, Li K, Li Q, Liu X, Ma X, Naidoo K, Pethybridge SJ, Sun J, Steenkamp ET, van der Nest M, van Wyk S, Wingfield MJ, Xiong C, Yue Q, Zhang X. (2018) IMA Genome-F 9 Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata. IMA Fungus 9(1):199-223. 10.5598/imafungus.2018.09.01.13 PDF
Ali DB, Marincowitz S, Wingfield MJ, Roux J, Crous PW, McTaggart AR. (2018) Novel Cryphonectriaceae from La Réunion and South Africa, and their pathogenicity on Eucalyptus. Mycological Progress 10.1007/s11557-018-1408-3
Meurisse N, Rassati D, Hurley BP, Brockerhoff EG, Haack RA. (2018) Common pathways by which non-native forest insects move internationally and domestically. Journal of Pest Science 10.1007/s10340-018-0990-0
Taerum SJ, De Beer ZW, Marincowitz S, Jankowiak R, Wingfield MJ. (2018) Ophiostoma quercus: an unusually diverse and globally widespread tree-infecting fungus. Fungal Biology 122(9):900-910. 10.1016/j.funbio.2018.05.005
Pieterse E, Aveling TAS, Jacobs A, Cowan DA. (2018) Seasonal variability in fungal endophytes from Aizoaceae plants in the Succulent Karoo biodiversity hotspot, South Africa. Journal of Arid Environments 156:19–26. 10.1016/j.jaridenv.2018.05.004https://doi.org/10.1016/j.jaridenv.2018.05.004
Klopper RR, De Beer ZW, Smith GF. (2018) Some outcomes of the Nomenclature Section of the XIXth International Botanical Congress. Bothalia 48(1):a2329. 10.4102/abc.v48i1.2329
Masekela R, Vosloo S, Venter SN, De Beer ZW, Green RJ. (2018) The lung microbiome in children with HIV-bronchiectasis: a cross-sectional pilot study. BMC Pulmonary Medicine 18:87. 10.1186/s12890-018-0632-6
Sayari M, Steenkamp ET, van der Nest MA, Wingfield BD. (2018) Diversity and evolution of polyketide biosynthesis gene clusters in the Ceratocystidaceae. Fungal Biology 122(9):856-866. 10.1016/j.funbio.2018.04.011
Clasen FJ, Pierneef RE, Slippers B, Reva O. (2018) EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes. BMC Genomics 19:323. 10.1186/s12864-018-4724-8
De Beer ZW, Marincowitz S, Duong TA, Wingfield MJ. (2018) (2592) Proposal to conserve Endoconidiophora fagacearum (Bretziella fagacearum, Ceratocystis fagacearum) against Chalara quercina (Thielaviopsis quercina) (Ascomycota: Sordariomycetes: Microascales). Taxon 67:440-440. 10.12705/672.14
Mangwende E, Aveling TAS, Kritzinger Q, Truter M. (2018) Alternaria alternata: A new seed-transmitted disease of coriander in South Africa. European Journal of Plant Pathology :1-8. 10.1007/s10658-018-1484-x PDF

Vacant positions

Programme Manager in Forest Molecular Genetics Programme (FMG), FABI - more information

Application deadline: 10 October 2018

 

Functional Genomics Technician in Forest Molecular Genetics Programme (FMG)FABI - more information

Application deadline: 10 October 2018

 

Fingerprinting Research Assistant in Forest Molecular Genetics Programme (FMG)FABI - more information

Application deadline: 10 October 2018 

 

PhD funded by SANBI, based in the Tree Protection Cooperative Programme (TPCP)FABI - more information

Topic: Impact of the polyphagous shot hole borer and its fungal symbiont on indigenous South African trees

Supervisors: Prof. Wilhelm de Beer & Dr Trudy Paap

Application deadline: 2 November 2018 (successful candidates will be notified by early December) - apply online here