Fungi play important roles in many aspects of human life, such as acting as decomposers in the carbon cycle, used to produce food and beverages, while many species produce useful pharmaceuticals or enzymes. For all of these benefits, fungi can cause serious problems for humans, animals and plants. One of the most important of these is the production of various mycotoxins in food and feed commodities that when consumed above threshold levels cause serious health problems in both humans and animals. Mycotoxins affect producers, suppliers, retailers and consumers, and places food security and the United Nations Sustainable Development Goal 2 (SDG2) of no hunger by 2030 at great risk. Our research is focused to better understand the fungal communities that produce mycotoxins in agricultural crops, food and animal feed. Emphasis is placed on the diversity and taxonomy of genera such as Alternaria, Aspergillus, Fusarium, Penicillium and Talaromyces, but many others are also studied. During this process we isolate and identify fungi using modern taxonomic approaches, publish and release newly generated DNA reference sequences, while building national biodiversity resources by depositing species to national and international fungal culture collections. Our group also aim to develop unified rapid monitoring methods to identify important mycotoxigenic species along the value chain. Ultimately, our goal is to secure food and feed from farm to fork for future generations.

Contact us

Contact Prof. Cobus Visagie
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Contact Dr. Neriman Yilmaz Visagie
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Telephone +27 12 420 5036

 

 

 

New Publications

Pham NQ, Wingfield BD, Barnes I, Gazis R, Wingfield MJ. (2024) Elsinoe species: The rise of scab diseases. Plant Pathology 10.1111/ppa.14015
Hough B, Wingfield B, Read DA. (2024) Identification and characterization of mycoviruses in transcriptomes from the fungal family Ceratocystidaceae. Virus Genes 10.1007/s11262-024-02112-4 PDF
Nkomo T, Bose T, Wingfield BD, Knoppersen R, Mbhele O, Nemesio‐Gorriz M, Rodas CA, Paetz C, Cilliers CT, Ferreira MA, Hammerbacher A. (2024) Geographic location shapes fungal communities associated with Epidendrum roots. Mycological Progress 23:54. 10.1007/s11557-024-01990-0
Visagie CM, Houbraken J, Yilmaz N. (2024) The re-identification of Penicillium and Talaromyces (Eurotiales) catalogued in South African culture collections. Persoonia 53:29–61. 10.3767/persoonia.2024.53.02
Yurkov A, Visagie CM, Crous PW, Hashimoto A, Baschien C, Begerow D, Kemler M, Schoutteten N, Stadler M, Wijayawardene NN, Hyde KD, Zhang N, Boekhout T, Group IYW, May TW, Thines M, Hawksworth DL. (2024) Cultures as types and the utility of viable specimens for fungal nomenclature. IMA Fungus 15:20. 10.1186/s43008-024-00155-8
Visagie CM, Yilmaz N, Allison JD, Barreto RW, Boekhout T, Boers J, Delgado MA, Dewing C, Fitza KNE, Furtado ECA, Gaya E, Hill R, Hobden A, Hu DM, Hülsewig T, Khonsanit A, Luangsa-Ard JJ, Mthembu A, Pereira CM, Price J-L, Pringle A, Qikani N, Sandoval-Denis M, Shumacher RK, Seifert KA, Slippers B, Tennakoon DS, Thanakitpipattana D, vanVuuren N, Groenewald JZ, Crous PW. (2024) New and Interesting Fungi. 7.. Fungal Systematics and Evolution 13:441–494. 10.3114/fuse.2024.13.12 PDF
Bhunjun C, Chen Y, Phukhamsakda C, Boekhout T, Groenewald J, McKenzie E, Francisco E, Frisvad J, Groenewald M, Hurdeal V, Luangsa-ard J, Perrone G, Visagie C, Bai F, Błaszkowski J, Braun U, D Souza F, De Q, Dutta A, Gonkhom D, Goto B, Guarnaccia V, Hagen F, Houbraken J, Lachance M, Li J, Luo K, Magurno F, Mongkolsamrit S, Robert V, Roy N, Tibpromma S, Wanasinghe D, Wang D, Wei D, Zhao C, Aiphuk W, Ajayi-Oyetunde O, Arantes T, Araujo J, Begerow D, Bakhshi M, Barbosa R, Behrens F, Bensch K, Bezerra J, Bilański P, Bradley C, Bubner B, Burgess T, Buyck B, Čadež N, Cai L, Calaça F, Campbell L, Chaverri P, Chen Y, Chethana K, Coetzee B, Costa M, Chen Q, Custódio F, Dai Y, Damm U, De Azevedo-Santiago A, De Miccolis-Angelini R, Dijksterhuis J, Dissanayake A, Doilom M, Dong W, Alvarez-Duarte E, Fischer M, Gajanayake A, Gené J, Gomdola D, Gomes A, Hausner G, He M, Hou L, Iturrieta-González I, Jami F, Jankowiak R, Jayawardena R, Kandemir H, Kiss L, Kobmoo N, Kowalski T, Landi L, Lin C, Liu J, Liu X, Loizides M, Luangharn T, Maharachchikumbura S, Makhathini Mkhwanazi G, Manawasinghe I, Marin-Felix Y, McTaggart A, Moreau P, Morozova O, Mostert L, Osiewacz H, Pem D, Phookamsak R, Pollastro S, Pordel A, Poyntner C, Phillips A, Phonemany M, Promputtha I, Rathnayaka A, Rodrigues A, Romanazzi G, Rothmann L, Salgado-Salazar C, Sandoval-Denis M, Saupe S, Scholler M, Scott P, Shivas R, Silar P, Souza-Motta C, Silva-Filho A, Spies C, Stchigel A, Sterflinger K, Summerbell R, Svetasheva T, Takamatsu S, Theelen B, Theodoro R, Thines M, Thongklang N, Torres R, Turchetti B, Van den Brule T, Wang X, Wartchow F, Welti S, Wijesinghe S, Wu F, Xu R, Yang Z, Yilmaz N, Yurkov A, Zhao L, Zhao R, Zhou N, Hyde K, Crous P. (2024) What are the 100 most cited fungal genera?. Studies in Mycology 108:1-411. 10.3114/sim.2024.108.01
van Vuuren N, Yilmaz N, Wingfield MJ, Visagie CM. (2024) Five novel Curvularia species (Pleosporaceae, Pleosporales) isolated from fairy circles in the Namib desert. Mycological Progress 23:39. 10.1007/s11557-024-01977-x
Visagie CM, Cruywagen EM, Duong TA. (2024) A new Paecilomyces from wooden utility poles in South Africa. Fungal Systematics and Evolution 13:163–181. 10.3114/fuse.2024.13.10
Ramaswe JB, Steenkamp ET, De Vos L, Fru FF, Adegeye OO, Wingfield BD. (2024) Sex pheromone receptor Ste2 orchestrates chemotropic growth towards pine root extracts in the pitch canker pathogen Fusarium circinatum. Pathogens 13:425. 10.3390/pathogens13050425
Visagie CM, Meyer H, Yilmaz N. (2024) Maize–Fusarium associations and their mycotoxins: Insights from South Africa. Fungal Biology 10.1016/j.funbio.2024.03.009
Hiroyuki S, Marincowitz S, Roux J, Paap T, Wingfield BD, Wingfield MJ. (2024) A new genus and species of Cryphonectriaceae causing stem cankers on plantation eucalypts in South Africa. Plant Pathology :1-14. 10.1111/ppa.13883 PDF
Price J-L, Visagie CM, Meyer H, Yilmaz N. (2024) Fungal species and mycotoxins Associated with Maize ear rots collected from the Eastern Cape in South Africa. Toxins 16:95. 10.3390/toxins16020095
Francinah M. Ratsoma, Nthabiseng Z. Mokoena, Quentin C. Santana, Brenda D. Wingfield, Emma T. Steenkamp, Thabiso E. Motaung. (2024) Characterization of the Fusarium circinatum biofilm environmental response role. Journal of Basic Microbiology 00(00):1-16. 10.1002/jobm.202300536
Visagie CM, Meijer M, Kraak B, Groenewald M, Houbraken J, Theelen B, Vorst Y, Boekhout T. (2024) Blastobotrys nigripullensis, a new yeast species isolated from a fungal outbreak on an ancient Roman shipwreck in the Netherlands. Antonie Van Leeuwenhoek 117:22. 10.1007/s10482-023-01898-x
Visagie CM, Yilmaz N, Kocsubé S, Frisvad JC, Hubka V, Samson RA, Houbraken J. (2024) A review of recently introduced Aspergillus, Penicillium, Talaromyces and other Eurotiales species. Studies in Mycology 107:1–66. 10.3114/sim.2024.107.01
Granados GM, Rodas CA, Vivas M, Wingfield MJ, Barnes I. (2023) Patterns of Dothistroma septosporum conidial dispersal in Colombian Pinus tecunumanii plantations. Forest Pathology (00):e12834. 10.1111/efp.12834
Visagie CM, Magistà D, Ferrara M, Balocchi F, Duong TA, Eichmeier A, Gramaje D, Aylward J, Baker SE, Barnes I, Calhoun S, De Angelis M, Frisvad JC, Hakalova E, Hayes RD, Houbraken J, Grigoriev IV, LaButti K, Leal C, Lipzen C, Ng V, Pangilinan J, Pecenka J, Perrone G, Piso A, Savage E, Spetik E, Wingfield MJ, Zhang Y, Wingfield BD. (2023) IMA genome-F18 - The reidentification of Penicillium genomes available in the NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviridae SC1. IMA Fungus 14(21) 10.1186/s43008-023-00121-w
Pham NQ, Wingfield MJ, Marincowitz S, Tanga AA, Tiki KR, Kassie WB, Hurley BP, Germishuizen I, Lawson SA, Healey MA, Wondafrash M. (2023) First report of the wattle rust pathogen, Uromycladium acaciae (Raveneliaceae, Pucciniales) in Ethiopia. Forestry: An International Journal of Forest Research :1–8. 10.1093/forestry/cpad040 PDF
Marincowitz S, Pham NQ, Wingfield BD, Roets F, Wingfield MJ. (2023) Microfungi associated with dying Euphorbia mauritanica in South Africa and their relative pathogenicity. Fungal Systematics and Evolution 12:59-71. 10.3114/fuse.2023.12.04 PDF
Crous P, Pancorbo F, Luangsa-ard J, Larsson E, Esteve-Raventós F, Bishop-Hurley S, Tan Y, Shivas R, Osieck E, Balashov S. (2023) Fungal Planet description sheets: 1478–1549. Persoonia 50:158-310. 10.3767/persoonia.2023.50.05
Crous P, Cowan D, Cruz R, Czachura P, De la Peña-Lastra S, Dovana F, Drury B, Fell J, Flakus A, Fotedar R, Jurjević , Chandranayaka S, Boekhout T, Osieck E, Shivas R, Tan Y, Bishop-Hurley S, Esteve-Raventós F, Larsson E, Luangsa-ard J, Pancorbo F, Balashov S, Baseia I, Kolecka A. (2023) Fungal Planet description sheets: 1478–1549 . Persoonia 50:58 – 310. 10.3767/persoonia.2023.50.05
Barnes I, Abdul Rauf MR, Fourie A, Japarudin Y, Wingfield MJ. (2023) Ceratocystis manginecans and not C. fimbriata a threat to propagated Acacia spp. in Sabah, Malaysia. Journal of Tropical Forest Science 35:16-26. 10.26525/jtfs2023.35S.SI.16
Ratsoma FM, Mokoena NZ, Santana QC, Wingfield BD, Steenkamp ET, Motaung TE. (2023) Characterization of Fusarium circinatum biofilm and its matrix’s environmental response role. RsearchSquare 00(00):00-00. 10.21203/rs.3.rs-3040583/v1
Katumanyane A, Slippers B, Wondafrash M, Malan AP, Hurley BP. (2023) Mechanisms behind differential white grub host susceptibility to entomopathogenic nematodes. Nematology 10.1163/15685411-bja10253
Suzuki H, Marincowitz S, Rodas CA, Wingfield BD, Wingfield MJ. (2023) First report of two Chrysoporthe species, Chrysoporthe doradensis and Chrysoporthe colombiana sp. nov. from Henriettea seemannii pathogenic to Eucalyptus in Colombia. Mycological Progress 22(44) 10.1007/s11557-023-01891-8
Hough B, Steenkamp ET, Wingfield B, Read DA. (2023) Fungal viruses unveiled: A comprehensive review of Mycoviruses. Viruses 15(5):1202. 10.3390/v15051202 PDF
Paap T, Santini A, Rodas CA, Granados GM, Pecori F, Wingfield MJ. (2023) Myrtus communis in Europe threatened by the pandemic and South African strains of the myrtle rust pathogen Austropuccinia psidii (Sphaerophragmiaceae, Pucciniales). NeoBiota 84:41-46. 10.3897/neobiota.84.95823 PDF
Kunene S, Steenkamp E, Motaung T. (2023) Isolation of extracellular vesicles from pine (Pinus sp.) leaves and roots. RsearchSquare 00(00):00-00. 10.21203/rs.3.rs-2912064/v1
Solís M, Hammerbacher A, Wingfield MJ, Naidoo S. (2023) A robust disease scoring method to screen Eucalyptus for resistance against the aggressive leaf blight pathogen, Teratosphaeria destructans. Plant Disease:1418 - 1424. 10.1094/PDIS-06-22-1347-RE PDF
Pal E, Allison JD, Hurley BP, Slippers B, Fourie G. (2023) Life History Traits of the Pentatomidae (Hemiptera) for the Development of Pest Management Tools. Forests 14(5) 10.3390/ f14050861 PDF
Katumanyane A, Slippers B, Wondafrash M, Malan AP, Hurley BP. (2023) Susceptibility of white grubs from forestry and sugarcane plantations in South Africa to entomopathogenic nematodes. BioControl 10.1007/s10526-023-10185-7
Suzuki H, Marincowitz S, Roux J, Wingfield BD, Wingfield MJ. (2023) First report of canker caused by Chrysoporthe austroafricana on the plantation-grown eucalypt Corymbia henryi in South Africa. Forestry :1-9. 10.1093/forestry/cpac054
Slippers B, Kleinsmith L, Nieuwenhuis R. (2023) National surveillance efforts bridge knowledge gaps. SA Grain Magazine (2):15-16.
Bose T, Dovey S, Brachmann A, Witfeld F, Begerow D, Kemler M, Roux J, Slippers B, Vivas M, Wingfield MJ. (2023) Retention of post-harvest residues enhances soil fungal biodiversity in Eucalyptus plantations. Forest Ecology and Management 532:120806. 10.1016/j.foreco.2023.120806
Visagie CM, Yilmaz N. (2023) Along the footpath of Penicillium discovery: Six new species from the Woodville Big Tree Forest Trail. Mycologia 115:87–106. 10.1080/00275514.2022.2135915
Hurley BP, Barnes I, Wingfield MJ. 2023. Diseases and Insect Pests of Australian Acacia Species. In: Wattles: Australian Acacia Species Around the World. Richardson DM, Le Roux JJ, Marchante E. (eds). CAB International, Oxfordshire, pp 312-326.
Visagie CM, Boekhout T, Theelen B, Dijksterhuis J, Yilmaz N, Seifert KA. (2023) Da Vinci's yeast: Blastobotrys davincii f.a., sp. nov. Yeast 40:7–31. 10.1002/yea.3816
Francina L. Bopape, Chrizelle W. Beukes, Kopotsa Katlego, Ahmed I. Hassen, Emma T. Steenkamp, Eastonce T. Gwata. (2022) Symbiotic Performance and Characterization of Pigeonpea (Cajanus cajan L. Millsp.) Rhizobia Occurring in South African Soils. Agriculture 13(1):30. https://doi.org/10.3390/agriculture13010030
Bian C, Takashi H, Houbraken J, Visagie CM, Ban S, Yaguchi T, D'hooge E, Sklenár F, Kusuya Y, Hubka V. (2022) Reducing the number of accepted species in Aspergillus series Nigri. Studies in Mycology 102:95–132. 10.3114/sim.2022.102.03
Wanjofu EI, Venter SN, Beukes CW, Steenkamp ET, Gwata ET, Muema EK. (2022) Nodulation and Growth Promotion of Chickpea by Mesorhizobium Isolates from Diverse Sources. MDPI-Microorganisms 10(12):1-16.
Chizné Peremore, Brenda Wingfield, Quentin Santana, Emma T Steenkamp. (2022) Biofilm characterization in the maize pathogen, Fusarium verticillioides. bioRxiv 00(00):00-00. 10.1101/2022.11.18.517
Wingfield BD, Berger DK, Coetzee MPA, Duong TA, Martin A, Pham NQ, Van den Berg N, Wilken PM, Arun-Chinnappa KS, Barnes I, Buthelezi S, Dahanayaka BA, Durán A, Engelbrecht J, Feurtey A, Fourie A, Fourie G, Hartley J, Kabwe ENK, Maphosa M, Narh Mensah DL, Nsibo DL, Potgieter L, Poudel B, Stukenbrock EH, Thomas C, Vaghefi N, Welgemoed T, Wingfield MJ. (2022) IMA genome‑F17 Draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina. 13:19. 10.1186/s43008-022-00104-3
Swalarsk Parry BS, Steenkamp ET, Van Wyk S, Santana QC, van der Nest MA, Hammerbacher A, Wingfield BD, De Vos L. (2022) Identification and characterization of a QTL for growth of Fusarium circinatum on pine-based medium. Journal of Fungi 8(11):1214. 10.3390/jof8111214
Sklenář F, Glässnerová K, Jurjević Z, Houbraken J, Samson RA, Visagie CM, Yilmaz N, Gene J, Cano J, Chen AJ, Nováková A, Yaguchi T, Kolařík M, Hubka V. (2022) Taxonomy of Aspergillus series Versicolores: species reduction and lessons learned about intraspecific variability. Studies in Mycology 102:53–93. 10.3114/sim.2022.102.02
Glässnerová K, Kolařík M, Kubátová A, Siqueira JPZ, Gené J, Visagie CM, Yaguchi T, Houbraken J, Sklenář F, Hubka V. (2022) A monograph of Aspergillus section Candidi. Studies in Mycology 102:1–51. 10.3114/sim.2022.102.01
Venter SN, Palmer M, Steenkamp ET. (2022) Relevance of prokaryotic subspecies in the age of genomics. New microbe and New infections 48 10.1016/j.nmni.2022.101024
Suzuki H, Marincowitz S, Winfield BD, Wingfield MJ. (2022) Genetic diversity and population structure of Chrysoporthe deuterocubensis isolates from Melastoma and Eucalyptus in Malaysia and Indonesia. Forest Pathology 10.1111/efp.12762
Crous PW, Aylward J, Marincowitz S, Wingfield BD, Wingfield MJ, et al.. (2022) Fungal Planet description sheets: 1383–1435. Persoonia 48:261. 10.3767/persoonia.2022.48.08 PDF
Solís M, Wingfield MJ, Hammerbacher A, Naidoo S. (2022) Comparison of the infection biology of Teratosphaeria destructans and Teratosphaeria epicoccoides on Eucalyptus. Plant Disease 10.1094/PDIS-09-21-1877-RE PDF
Chen Q, Suzuki H, Marincowitz S, Chen SF, Wingfield MJ, Winfield BD, et al. (2022) Genera of phytopathogenic fungi: GOPHY 4. Studies in Mycology 101:417-564. 10.3114/sim.2022.101.06
Ashtekar N, Rajeshkumar KC, Yilmaz N, Visagie CM. (2022) A new Penicillium section Citrina species and series from India. Mycological Progress 21:42. 10.1007/s11557-022-01802-3
Jami F, Marincowitz S, Durán A, Slippers B, Abad JIM, Chen S, Wingfield MJ. (2022) Botryosphaeriaceae diversity on Eucalyptus clones in different climate zones of Indonesia. Forest Pathology :1-14. 10.1111/efp.12737
Li JQ, Wingfield MJ, Barnes I, Chen SF. (2022) Calonectria in the age of genes and genomes: Towards understanding an important but relatively unknown group of pathogens. Molecular Plant Pathology 10.1111/mpp.13209 PDF
Mavima L, Beukes CW, Palmer M, De Meyer SE, James EK, Maluk M, Muasya MA, Avontuur JR, Chan WY, Venter SN, Steenkamp ET. (2022) Delineation of Paraburkholderia tuberum sensu stricto and description of Paraburkholderia podalyriae sp. nov. nodulating the South African legume Podalyria calyptrata. Systematic and Applied Microbiology 45(3) 10.1016/j.syapm.2022.126316
Pham NQ, Marincowitz S, Chen SF, Yaparudin J, Wingfield MJ. (2022) Calonectria species, including four novel taxa, associated with Eucalyptus in Malaysia. Mycological Progress 21:181-197. 10.1007/s11557-021-01768-8 PDF
Makwela MC, Hammerbacher A, Vivas M, Coetzee MPA, Wingfield BD, van Ede G, Bose T. (2022) Uncovering the mycorrhizal community of two Habenaria orchids in South Africa. South African Journal of Botany 10.1016/j.sajb.2022.02.020
Wingfield BD, De Vos L, Wilson AM, Duong AT, Vaghefi N, Botes A, Kharwar RN, Chand R, Poudel B, Aliyu H, Barbetti MJ, Chen S, de Maayer P, Liu F, Navathe S, Sinha S, Steenkamp ET, Suzuki H, Tshisekedi KA, van der Nest MA, Wingfield MJ. (2022) Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta. IMA Fungus 13(1):3. 10.1186/s43008-022-00089-z
Makwela MC, Hammerbacher A, Coetzee MPA, Wingfield BD, van Ede G, Bose T. (2022) Fungal diversity associated with the mycorrhizosphere soil of Brachycorythis conica subsp. transvaalensis, a critically endangered and endemic terrestrial orchid from South Africa. South African Journal of Botany 00:1-8. 10.1016/j.sajb.2022.01.019
Aylward J, Wingfield MJ, Roets F, Wingfield BD. (2022) A high-quality fungal genome assembly resolved from a sample accidentally contaminated by multiple taxa. BioTechniques 72:39-50. 10.2144/btn-2021-0097
Avontuur JR, Palmer M, Beukes CW, Wai YC, Tasiya T, van Zyl E, Coetzee MPA, Stepkowski T, Venter SN, Steenkamp ET. (2022) Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns. Molecular Phylogenetics and Evolution 167 10.1016/j.ympev.2021.107338 PDF
Crous PW, Osieck ER;J, Shivas RG;Z, Bañares A;B, Burgess TI, Cabero J;C, Ferreira RJ;F, Ivanova DD;I, Lebeuf R;L, McTaggart AR, Mehrabi-Koushki M;M, Nel WJ, Nguyen TH;N, Reul M;R, Sato T;S, Tonegawa C;T, Visagie CM, C.M.; Vizzini A;V. (2022) Fungal Planet description sheets: 1284-1382. Persoonia - Molecular Phylogeny and Evolution of Fungi 47(6):1284-1382. 10.3767/persoonia.2021.47.06
Barnes I, van der Nest A, Granados GM, Wingfield MJ. 2022. Dothistroma needle blight. In: Forest Microbiology. Asiegbu F, Kovalchuk A. (eds). Elsevier, pp 179 - 199.
Guignard Q, Allison JD, Slippers B. (2022) The evolution of insect visual opsin genes with specific consideration of the influence of ocelli and life history traits. 22:2. 10.1186/s12862-022-01960-8
Cano-Lira JF, Badali F, Asselman P, Arenas F, Antonín V, Angelini C, Amaral AGG, Altés A, Alexandrova AV, Akhmetova G, Baghela A, Bañares A, Câmara MPS, Cabero J, Burgress TI, Bukharova NV, Biketova A, Berraf-Tebbal A, Bellanger JM, Baseia IG, Barreto RW, Ageev DV, Abrinbana M, Johnston PR, Bulgakov TS, Balashov S, Dima B, Starink-Willemse M, van Iperen AL, Boers J, Jurjević Z, Osieck ER, Morozova OV, Pinruan U, Abdollahzadeh J, Zhao L, Shivas RG, Moreno G, McMullan-Fisher S, Lebel T, Decock CA, Alvarado P, Sommai S, Crous PW. (2021) Fungal Planet description sheets: 1284-1382. Persoonia 47(29):1284-1382. 10.3767/persoonia.2021.47.06
Dittrich-Schröder G, Garnas JR, Arriagades-Cares D, Ahumada R, Hurley BP, Lawson SA, Slippers B. (2021) Diversity and Introduction History of Glycaspis brimblecombei Reflects a History of Bridgeheads and Distinct Invasions. Frontiers in Forests and Global Change 4:1-11. 10.3389/ffgc.2021.783603
Wondafrash M, Slippers B, Asfaw BA, Makowe IA, Jenya H, Bush S, Kayumba I, Nambazimana A, van der Lingen S, Hurley BP. (2021) Tracing the distribution of natural enemies of non-native invasive eucalypt insect pests in sub- Saharan Africa. Southern Forests: a Journal of Forest Science 83(3):1-10. 10.2989/20702620.2021.1960218
Houbraken J, Visagie CM, Frisvad J. (2021) Recommendations To Prevent Taxonomic Misidentification of Genome-Sequenced Fungal Strains. Microbiology Resource Announcements 10:e0107420. 10.1128/MRA.01074-20
Gevers CR, Slippers B, Germishuizen I, Dittrich-Schröder G, Hurley BP. (2021) The distribution and diversity of Leptocybe invasa (Hymenoptera: Eulophidae) and its gall associates in South Africa. Southern Forests 10.2989/20702620.2021.1944395
Pyrri I, Visagie CM, Soccio P, Houbraken J. (2021) Re-Evaluation of the Taxonomy of Talaromyces minioluteus. Journal of Fungi 7:993. 10.3390/jof7110993
Sun BD, Visagie CM, Chen AJ, Houbraken J. (2021) A taxonomic review of Penicillium section Charlesia. Mycological Progress 20(11):1383–1397. 10.1007/s11557-021-01735-3
Zhang Y, Zhou Y, Sun W, Zhao L, Pavlic-Zupanc D, Crous PW, Slippers B, Dai Y. (2021) Toward a natural classification of Botryosphaeriaceae: A study of the type specimens of Botryosphaeria sensu lato. Frontiers in Microbiology 12:2938. 10.3389/fmicb.2021.737541
NandaKafle G, Huegen T, Potgieter SC, Steenkamp ET, Venter SN, Brözel VS. (2021) Niche Preference of Escherichia coli in a Peri-Urban Pond Ecosystem. Life 11 10.3390/life11101020 PDF
Visagie CM, Goodwell M, Nkwe DO. (2021) Aspergillus diversity from the Gcwihaba Cave in Botswana and description of one new species. Fungal Systematics and Evolution 8:81-89. 10.3114/fuse.2021.08.07
Nel WJ, De Beer ZW, Wingfield MJ, Poulsen M, Aanen DK, Wingfield BD, Duong TA. (2021) Phylogenetic and phylogenomic analyses reveal two new genera and three new species of ophiostomatalean fungi from termite fungus combs. Mycologia 113(6):1199-1217. 10.1080/00275514.2021.1950455
Thabiso E Motaung, Emma T Steenkamp. (2021) Extracellular Vesicles in Teasing Apart Complex Plant-Microbiota Links: Implications for Microbiome-Based Biotechnology. mSystems 6(4):e00734-21. 10.1128/mSystems.00734-21.
Ostafińska A, Jankowiak R, Bilański P, Solheim H, Wingfield MJ. (2021) Six new species of Sporothrix from hardwood trees in Poland. MycoKeys 82 10.3897/mycokeys.82.66603
Guignard Q, Spaethe J, Slippers B, Strube-Bloss M, Allison J. (2021) Evidence for UV-green dichromacy in the basal hymenopteran Sirex noctilio (Siricidae). Scientific Reports 11(1):15601. 10.1038/s41598-021-95107-2 PDF
Bennett PI, Tabima JF, Leon AL, Browning J, Wingfield MJ, LeBoldus JM. (2021) Spatial genetic structure of the insect-vectored conifer pathogen Leptographium wageneri suggest long distance gene flow among Douglas-fir plantations in western Oregon. Frontiers in Forests and Global Change 4:695981. 10.3389/ffgc.2021.695981
Aylward J, Havenga M, Dreyer LL, Roets F, Wingfield BD, Pérez CA, Ramírez-Berrutti N, Carnegie AJ, Wingfield MJ. (2021) Genetic diversity of Teratosphaeria pseudoeucalypti in Eucalyptus plantations in Australia and Uruguay. Australasian Plant Pathology 50:639–649. 10.1007/s13313-021-00800-5
Wilson AM, Lelwala RV, Taylor PWJ, Wingfield MJ, Wingfield BD. (2021) Unique patterns of mating pheromone presence and absence could result in the ambiguous sexual behaviors of Colletotrichum species. G3 Gene|Genomes|Genetics :jkab187. 10.1093/g3journal/jkab187 PDF
Linnakoski R, Lasarov I, Veteli P, Tikkanen O-P, Viiri H, Jyske T, Kasanen R, Duong TA, Wingfield MJ. (2021) Filamentous fungi and yeasts associated with mites phoretic on Ips typographus in Eastern Finland. Forests 12(6):743. 10.3390/f12060743
Visagie CM, Frisvad JC, Houbraken J, Visagie A, Samson RA, Jacobs K. (2021) A re-evaluation of Penicillium section Canescentia, including the description of five new species. Persoonia 46:163-187. 10.3767/persoonia.2021.46.06
Fraser S, McTaggart AR, Roux J, Wingfield MJ. (2021) Hyperparasitism by Sphaerellopsis macroconidialis may lower over-wintering survival of Uromycladium acaciae. Forest Pathology 10.1111/efp.12691
Crous PW, Hernández-Restrepo M, Schumacher RK, Cowan DA, Maggs-Kölling G, Marais E, Wingfield MJ, Yilmaz N, Adan OCG, Akulov A, Álvarez Duarte E, Berraf-Tebbal A, Bulgakov TS, Carnegie AJ, de Beer ZW, Decock C, Dijksterhuis C, Duong TA, Eichmeier A, Hien LT, Houbraken JAMP, Khanh TN, Liem NV, Lombard L, Lutzoni FM, Miadlikowska JM, Nel WJ, Pascoe IG, Roets F, Roux J, Samson RA, Shen M, Spetik M, Thangavel R, Thanh HM, Thao LD, van Nieuwenhuijzen EJ, Zhang JQ, Zhang Y, Zhao LL, Groenewald JZ. (2021) New and Interesting Fungi. 4. Fungal Systematics and Evolution 7:255-343. 10.3114/fuse.2021.07.13 PDF
Lynn KMT, Wingfield MJ, Durán A, Oliveira LSS, de Beer ZW, Barnes I. (2021) Novel Fusarium mutualists of two Euwallacea species infesting Acacia crassicarpa in Indonesia. Mycologia 113(3):536-558. 10.1080/00275514.2021.1875708 PDF
Yilmaz N, Sandoval-Denis M, Lombard L, Visagie CM, Wingfield BD, Crous PW. (2021) Redefining species limits in the Fusarium fujikuroi species complex. Persoonia 46:129-162. 10.3767/persoonia.2021.46.05
van der Nest MA, Chávez R, De Vos L, Duong TA, Gil-Durán C, Ferreira MA, Lane FA, Levicán G, Santana QC, Steenkamp ET, Suzuki H, Tello M, Rakoma JR, Vaca I, Valdés N, Wilken PM, Wingfield MJ, Wingfield BD. (2021) Draft genome sequences of Penicillium roqueforti, Fusarium sororula, Chrysoporthe puriensis, and Chalaropsis populi. IMA Fungus 12:5. 10.1186/s43008-021-00055-1 PDF
Phasha MM, Wingfield MJ, Wingfield BD, Coetzee MPA, Hallen-Adams H, Fru F, Swalarsk-Parry BS, Yilmaz N, Duong TA, Steenkamp ET. (2021) Ras2 is important for growth and pathogenicity in Fusarium circinatum. 150:103541. 10.1016/j.fgb.2021.103541
Migliorini D, Messal M, Santini A, Ramos AP, Talhinhas P, Wingfield MJ, Burgess T. (2021) Metabarcoding reveals southern hemisphere fungal endophytes within wood of cultivated Proteaceae in Portugal. European Journal of Plant Pathology 10.1007/s10658-021-02233-8
van Wyk S, Wingfield B, De Vos L, van der Merwe A, Steenkamp E. (2021) Genome-Wide Analyses of Repeat-Induced Point Mutations in the Ascomycota. Frontiers in Microbiology 11(Article 622368):1-17. 10.3389/fmicb.2020.622368 PDF
Fraser S, McTaggart AR, Roux J, Nel J, Potgieter J, Shuey L, Somchat C, Wingfield MJ. (2021) The life cycle and field epidemiology of Uromycladium acaciae (Pucciniales) on Acacia mearnsii in South Africa. Annals of Applied Biology 10.1111/aab.12677
Beukes CW, Venter SN, Steenkamp ET. (2021) The history and distribution of nodulating Paraburkholderia, a potential inoculum for Fynbos forage species. Grass and Forage Science 76:10-32. 10.1111/gfs.12522
Soewarto J, Somchit C, du Plessis E, Barnes I, Granados GM, Wingfield MJ, Shuey L, Bartlett M, Fraser S, Scott P, Miller E, Waipara N, Sutherland R, Ganley B. (2021) Susceptibility of native New Zealand Myrtaceae to the South African strain of Austropuccinia psidii: A biosecurity threat. Plant Pathology 70:667-675. 10.1111/ppa.13321
Geiser DM, Al-Hatmi A, Aoki T, Arie T, Balmas V, Barnes I, Bergstrom GC, Bhattacharyya MKK, Blomquist CL, Bowden R, Brankovics B, Brown DW, Burgess LW, Bushley K, Busman M, Cano-Lira JF, Carrillo JD, Chang HX, Chen CY, Chen W, Chilvers MI, Chulze SN, Coleman JJ, Cuomo CA, de Beer ZW, de Hoog GS, Del Castillo-Múnera J, Del Ponte E, Diéguez-Uribeondo J, Di Pietro A, Edel-Hermann V, Elmer WH, Epstein L, Eskalen A, Esposto MC, Everts KL, Fernández-Pavía SP, da Silva GF, Foroud NA, Fourie G, Frandsen RJN, Freeman S, Freitag M, Frenkel O, Fuller KK, Gagkaeva T, Gardiner DM, Glenn AE, Gold S, Gordon T, Gregory NF, Gryzenhout M, Guarro J, Gugino B, Gutiérrez S, Hammond-Kosack K, Harris LJ, Homa M, Hong CF, Hornok L, Huang JW, Ilkit M, Jacobs A, Jacobs K, Jiang C, Jimenez-Gasco MDM, Kang S, Kasson MT, Kazan K, Kennell JC, Kim H, Kistler HC, Kuldau GA, Kulik T, Kurzai O, Laraba I, Laurence MH, Lee TY, Lee YW, Lee YH, Leslie JF, Liew ECY, Lofton LW, Logrieco A, Sánchez López-Berges M, Luque AG, Lysøe E, Ma LJ, Marra RE, Martin FN, May SR, McCormick S, McGee CT, Meis JF, Migheli Q, Mohamed Nor NMI, Monod M, Moretti A, Mostert D, Mulé G, Munaut F, Munkvold GP, Nicholson P, Nucci M, O'Donnell K, Pasquali M, Pfenning LH, Prigitano A, Proctor R, Ranque S, Rehner S, Rep M, Rodríguez-Alvarado G, Rose LJ, Roth MG, Ruiz-Roldán C, Saleh AA, Salleh B, Sang H, Scandiani M, Scauflaire J, Schmale D 3, Short DP, Šišić A, Smith J, Smyth CW, Son H, Spahr E, Stajich JE, Steenkamp E, Steinberg C, Subramaniam R, Suga H, Summerell BA, Susca A, Swett CL, Toomajian C, Torres-Cruz TJ, Tortorano AM, Urban M, Vaillancourt LJ, Vallad GE, van der Lee T, Vanderpool D, van Diepeningen AD, Vaughan M, Venter E, Vermeulen M, Verweij PE, Viljoen A, Waalwijk C, Wallace EC, Walther G, Wang J, Ward T, Wickes B, Wiederhold NP, Wingfield MJ, Wood AKM, Xu JR, Yang XB, Yli-Matilla T, Yun SH, Zakaria L, Zhang H, Zhang N, Zhang S, Zhang X. (2021) Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex. Phytopathology 111(7):1064-1079. 10.1094/PHYTO-08-20-0330-LE
Li JQ, Barnes I, Liu FF, Wingfield MJ, Chen SF. (2021) Global genetic diversity and mating type distribution of Calonectria pauciramosa: an important wide host-range plant pathogen. Plant Disease 10.1094/PDIS-05-20-1050-RE
Crous PW, Lombard L, Sandoval-Denis M, Seifert KA, Schroers HJ, Chaverri P, Neriman Yilmaz, Visagie CM. (2021) Fusarium: more than a node or a foot-shaped basal cell. Studies In Mycology 98:100116. 10.1016/j.simyco.2021.100116
Havenga M, Wingfield BD, Wingfield MJ, Marincowitz S, Dreyer LL, Roets F, Japarudin Y, Aylward J. (2021) Genetic recombination in Teratosphaeria destructans causing a new disease outbreak in Malaysia. Forest Pathology 51(3):e12683. 10.1111/efp.12683 PDF
Havenga M, Wingfield BD, Wingfield MJ, Dreyer LL, Roets F, Aylward J. (2021) Genetic response to nitrogen starvation in the aggressive Eucalyptus foliar pathogen Teratosphaeria destructans. Current Genetics 10.1007/s00294-021-01208-w
Sayari M, van der Nest MA, Steenkamp ET, Rahimlou S, Hammerbacher A, Wingfield BD. (2021) Characterization of the Ergosterol Biosynthesis Pathway in Ceratocystidaceae. Journal of Fungi 7(3):237.